6EF3
date
authors
compound
source
symmetry
R_factor
R_Free
crystal
cell
length a
length b
length c
angle alpha
angle beta
angle gamma
method
X-Ray Diffraction
resolution
ligand
ADP
,
ATP
enzyme
Gene
Ontology
Chain
Function
Process
Component
1
proteasome core complex, bet...
2
proteasome core complex, bet...
3
endopeptidase activator acti...
proteasome core complex, bet...
4
endopeptidase activator acti...
proteasome core complex, bet...
5
proteasome core complex, bet...
6
7
proteasome core complex, bet...
A
proteasome core complex, alp...
B
proteasome core complex, alp...
C
proteasome core complex, alp...
D
E
proteasome core complex, alp...
F
proteasome core complex, alp...
G
proteasome core complex, alp...
H
proteasome-activating ATPase...
I
proteasome-activating ATPase...
J
K
proteasome-activating ATPase...
L
M
r
Lys63-specific deubiquitinas...
u
cytosolic large ribosomal su...
Primary reference
Substrate-engaged 26S proteasome structures reveal mechanisms for ATP-hydrolysis-driven translocation., de la Pena AH, Goodall EA, Gates SN, Lander GC, Martin A, Science. 2018 Oct 11. pii: science.aav0725. doi: 10.1126/science.aav0725. PMID:
30309908
Data retrieval
Asymmetric unit, PDB entry:
[header only]
[complete with coordinates]
(804 Kb)
[Save to disk]
Biological Unit Coordinates
(6ef3.pdb1.gz) 790 Kb
LPC:
Ligand-Protein Contacts
for 6EF3
CSU:
Contacts of Structural Units
for 6EF3
Retrieve 6EF3 in
mmCIF
format
[Save to disk]
SEQRES to COORDINATES
correlation for
6EF3
from
S2C
,
[Save to disk]
View 6EF3 in 3D
Proteopedia
, because life has more than 2D.
On
Jmol
, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
On
FirstGlance
, an excellent tool for a guided tour on the structure components, by
E. Martz
.
Structure-derived information
Dipole
moment, from
Dipole Server
at Weizmann Institute
Sequence-derived information
View one-letter amino acid or nucleotide sequence for each chain:
[6ef3_H]
[6ef3_I]
[6ef3_J]
[6ef3_K]
[6ef3_L]
[6ef3_M]
[6ef3_1]
[6ef3_2]
[6ef3_3]
[6ef3_4]
[6ef3_5]
[6ef3_6]
[6ef3_7]
[6ef3_A]
[6ef3_B]
[6ef3_C]
[6ef3_D]
[6ef3_E]
[6ef3_F]
[6ef3_G]
[6ef3_n]
[6ef3_r]
[6ef3_s]
[6ef3_u]
SWISS-PROT
database:
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