6EGE Transferase Transferase Inhibitor date Aug 19, 2018
title Crystal Structure Of The Unphosphorylated Irak4 Kinase Domai A Type I Inhibitor
authors R.Ferrao, Q.Liu, H.Wu
compound source
Molecule: Interleukin-1 Receptor-Associated Kinase 4
Chain: D, A
Fragment: Protein Kinase Domain Residues 164-460
Synonym: Irak-4,Renal Carcinoma Antigen Ny-Ren-64
Ec: 2.7.11.1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Irak4
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111
symmetry Space Group: P 1 21 1
R_factor 0.178 R_Free 0.201
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.888 58.553 76.101 90.00 112.78 90.00
method X-Ray Diffractionresolution 1.40 Å
ligand DL1 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (285 Kb) [Save to disk]
  • Biological Unit Coordinates (6ege.pdb1.gz) 275 Kb
  • LPC: Ligand-Protein Contacts for 6EGE
  • CSU: Contacts of Structural Units for 6EGE
  • Structure Factors (2760 Kb)
  • Retrieve 6EGE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6EGE from S2C, [Save to disk]
    • View 6EGE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6EGE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ege_D] [6ege_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6EGE
  • Community annotation for 6EGE at PDBWiki (http://pdbwiki.org)

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