6EK9 Metal Binding Protein date Sep 25, 2017
title Cytosolic Copper Storage Protein Csp From Streptomyces Livid Loaded Form
authors M.L.Straw, A.K.Chaplin, M.A.Hough, J.A.R.Worrall
compound source
Molecule: Cytosolic Copper Storage Protein
Chain: A
Engineered: Yes
 Organism_scientific: Streptomyces Lividans
Organism_taxid: 1916
Gene: Sliv_21385
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: I 2 2 2
R_factor 0.206 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.081 64.138 66.003 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand CU1 enzyme
Primary referenceA cytosolic copper storage protein provides a second level of copper tolerance in Streptomyces lividans., Straw ML, Chaplin AK, Hough MA, Paps J, Bavro VN, Wilson MT, Vijgenboom E, Worrall JAR, Metallomics. 2018 Jan 24;10(1):180-193. doi: 10.1039/c7mt00299h. PMID:29292456
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (6ek9.pdb1.gz) 154 Kb
  • LPC: Ligand-Protein Contacts for 6EK9
  • CSU: Contacts of Structural Units for 6EK9
  • Structure Factors (245 Kb)
  • Retrieve 6EK9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6EK9 from S2C, [Save to disk]
    • View 6EK9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6EK9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ek9_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6EK9
  • Community annotation for 6EK9 at PDBWiki (http://pdbwiki.org)

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