6EKD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	B9K, BME, EDO	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structural Optimization of a Pyridinylimidazole Scaffold: Shifting the Selectivity from p38alpha Mitogen-Activated Protein Kinase to c-Jun N-Terminal Kinase 3., Ansideri F, Macedo JT, Eitel M, El-Gokha A, Zinad DS, Scarpellini C, Kudolo M, Schollmeyer D, Boeckler FM, Blaum BS, Laufer SA, Koch P, ACS Omega. 2018 Jul 31;3(7):7809-7831. doi: 10.1021/acsomega.8b00668. Epub 2018, Jul 12. PMID:30087925

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk] Biological Unit Coordinates (6ekd.pdb1.gz) 108 Kb LPC: Ligand-Protein Contacts for 6EKD CSU: Contacts of Structural Units for 6EKD Structure Factors (173 Kb) Retrieve 6EKD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6EKD from S2C, [Save to disk]

View 6EKD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6ekd_A] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---