6ERF | Dna Binding Protein | date | Oct 18, 2017 |
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title | Complex Of Aplf Factor And Ku Heterodimer Bound To Dna | ||||||||||||||
authors | C.Nemoz, P.Legrand, V.Ropars, J.B.Charbonnier | ||||||||||||||
compound | source | ||||||||||||||
Molecule: X-Ray Repair Cross-Complementing Protein 6 Chain: A, C, E, G Synonym: 5'-Deoxyribose-5-Phosphate Lyase Ku70,5'-Drp Lyase Kda Subunit Of Ku Antigen,Atp-Dependent Dna Helicase 2 Subu Dependent Dna Helicase II 70 Kda Subunit,Ctc Box-Binding Fa Kda Subunit,Ctcbf,Dna Repair Protein Xrcc6,Lupus Ku Autoant Protein P70,Ku70,Thyroid-Lupus Autoantigen,Tlaa,X-Ray Repai Complementing Defective Repair In Chinese Hamster Cells 6; Ec: 3.6.4.-,4.2.99.- Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Xrcc6, G22p1 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf21 Expression_system_vector: Unidentified Baculovirus | ||||||||||||||
Molecule: X-Ray Repair Cross-Complementing Protein 5 Chain: B, D, F, H Synonym: 86 Kda Subunit Of Ku Antigen,Atp-Dependent Dna Hel Subunit 2,Atp-Dependent Dna Helicase II 80 Kda Subunit,Ctc Binding Factor 85 Kda Subunit,Ctcbf,Dna Repair Protein Xrcc Ku86,Lupus Ku Autoantigen Protein P86,Nuclear Factor Iv,Thy Autoantigen,Tlaa,X-Ray Repair Complementing Defective Repai Chinese Hamster Cells 5 (Double-Strand-Break Rejoining); Ec: 3.6.4.- Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Xrcc5, G22p2 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf21 Expression_system_vector: Unidentified Baculovirus | ||||||||||||||
Molecule: Dna (5'- D(Gptptptptptpapgptptptpaptptpgpgpgpcpgp 3'); Chain: I, K, M, O Engineered: Yes |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||
Molecule: Dna (34-Mer) Chain: J, L, N, P Engineered: Yes |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||
Molecule: Aprataxin And Pnk-Like Factor Chain: Q, R, S, T Synonym: Apurinic-Apyrimidinic Endonuclease Aplf,Pnk And Ap Fha Domain-Containing Protein,Xrcc1-Interacting Protein 1; Ec: 4.2.99.18 Engineered: Yes |
Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 | ||||||||||||||
symmetry | Space Group: P 1 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 3.01 Å | ||||||||||||
ligand | enzyme | Hydrolase E.C.3.6.4 BRENDA | |||||||||||||
Gene Ontology |
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Primary reference | XLF and APLF bind Ku80 at two remote sites to ensure DNA repair by non-homologous end joining., Nemoz C, Ropars V, Frit P, Gontier A, Drevet P, Yu J, Guerois R, Pitois A, Comte A, Delteil C, Barboule N, Legrand P, Baconnais S, Yin Y, Tadi S, Barbet-Massin E, Berger I, Le Cam E, Modesti M, Rothenberg E, Calsou P, Charbonnier JB, Nat Struct Mol Biol. 2018 Oct;25(10):971-980. doi: 10.1038/s41594-018-0133-6., Epub 2018 Oct 5. PMID:30291363 |
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Sequence-derived information |
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