6FAI | Ribosome | date | Dec 15, 2017 |
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title | Structure Of A Eukaryotic Cytoplasmic Pre-40s Ribosomal Subu | ||||||||||||||
authors | A.Scaiola, C.Pena, M.Weisser, D.Boehringer, M.Leibundgut, P.Kling Nerurkar, S.Gerhardy, V.G.Panse, N.Ban | ||||||||||||||
compound | source | ||||||||||||||
Molecule: 40s Ribosomal Protein S27-A Chain: b Synonym: Rp61,Small Ribosomal Subunit Protein Es27-A,Ys20 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S28-A Chain: c Synonym: S33,Small Ribosomal Subunit Protein Es28-A,Ys27 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S29-A Chain: d Synonym: S36,Small Ribosomal Subunit Protein Us14-A,Ys29 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S30-A Chain: e Synonym: Small Ribosomal Subunit Protein Es30-A |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: Guanine Nucleotide-Binding Protein Subunit Beta-L Protein; Chain: g Synonym: Receptor For Activated C Kinase,Receptor Of Activa Protein Kinase C 1,Rack1,Small Ribosomal Subunit Protein Ra |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: Pre-Rrna-Processing Protein Pno1 Chain: h Synonym: Partner Of Nob1,Ribosomal Rna-Processing Protein 2 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: Essential Nuclear Protein 1 Chain: I |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: Protein Ltv1 Chain: j Synonym: Low-Temperature Viability Protein 1 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: Ribosome Biogenesis Protein Tsr1 Chain: k Synonym: 20s Rrna Accumulation Protein 1 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: Serinethreonine-Protein Kinase Rio2 Chain: l Ec: 2.7.11.1 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 20s Ribosomal Rna Chain: 2 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S0-A Chain: A Synonym: Nucleic Acid-Binding Protein Nab1a,Small Ribosomal Protein Us2-A; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S1-A Chain: B Synonym: Rp10a,Small Ribosomal Subunit Protein Es1-A |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S2 Chain: C Synonym: Omnipotent Suppressor Protein Sup44,Rp12,S4,Small Subunit Protein Us5,Ys5; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S3 Chain: D Synonym: Rp13,Small Ribosomal Subunit Protein Us3,Ys3 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S4-A Chain: E Synonym: Rp5,S7,Small Ribosomal Subunit Protein Es4-A,Ys6 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S5 Chain: F Synonym: Rp14,S2,Small Ribosomal Subunit Protein Us7,Ys8 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S6-A Chain: G Synonym: Rp9,S10,Small Ribosomal Subunit Protein Es6-A,Ys4 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S7-A Chain: H Synonym: Rp30,Rp40,Small Ribosomal Subunit Protein Es7-A |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S8-A Chain: I Synonym: Rp19,S14,Small Ribosomal Subunit Protein Es8-A,Ys9 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S9-A Chain: J Synonym: Rp21,S13,Small Ribosomal Subunit Protein Us4-A,Yp2 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S11-A Chain: L Synonym: Rp41,S18,Small Ribosomal Subunit Protein Us17-A,Ys |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S12 Chain: M Synonym: Small Ribosomal Subunit Protein Es12 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S13 Chain: N Synonym: S27a,Small Ribosomal Subunit Protein Us15,Ys15 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S14-A Chain: O Synonym: Rp59a,Small Ribosomal Subunit Protein Us11-A |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S15 Chain: P Synonym: Rig Protein,Rp52,S21,Small Ribosomal Subunit Prote Ys21; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S16-A Chain: Q Synonym: Rp61r,Small Ribosomal Subunit Protein Us9-A |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S17-A Chain: R Synonym: Rp51a,Small Ribosomal Subunit Protein Es17-A |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S18-A Chain: S Synonym: Small Ribosomal Subunit Protein Us13-A |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S19-A Chain: T Synonym: Rp55a,S16a,Small Ribosomal Subunit Protein Es19-A, Ys16a; |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S20 Chain: U Synonym: Small Ribosomal Subunit Protein Us10 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S21-A Chain: V Synonym: S26,Small Ribosomal Subunit Protein Es21-A,Ys25 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S22-A Chain: W Synonym: Rp50,S24,Small Ribosomal Subunit Protein Us8-A,Yp5 |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S23-A Chain: X Synonym: Rp37,S28,Small Ribosomal Subunit Protein Us12-A,Ys |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S24-A Chain: Y Synonym: Rp50,Small Ribosomal Subunit Protein Es24-A |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
Molecule: 40s Ribosomal Protein S25-A Chain: Z Synonym: Rp45,S31,Small Ribosomal Subunit Protein Es25-A,Ys |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||
symmetry | Space Group: P 1 |
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crystal cell |
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method | Electron Microscopy | resolution | 3.40 Å | ||||||||||||
ligand | MG, ZN | enzyme | Transferase E.C.2.7.11.1 BRENDA | ||||||||||||
Gene Ontology | |||||||||||||||
Primary reference | Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit., Scaiola A, Pena C, Weisser M, Bohringer D, Leibundgut M, Klingauf-Nerurkar P, Gerhardy S, Panse VG, Ban N, EMBO J. 2018 Feb 19. pii: embj.201798499. doi: 10.15252/embj.201798499. PMID:29459436 |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |