6FQD Signaling Protein date Feb 13, 2018
title Escherichia Coli Signal Recognition Particle Receptor Ftsy N
authors D.Mrusek
compound source
Molecule: Signal Recognition Particle Receptor Ftsy
Chain: A, B
Synonym: Srp Receptor
Engineered: Yes
Organism_scientific: Escherichia Coli (Strain K12)
Organism_taxid: 83333
Strain: K12
Gene: Ftsy, B3464, Jw3429
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: I 4
R_factor 0.177 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
110.963 110.963 110.632 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand GDP, K enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCo-translational Folding Intermediate Dictates Membrane Targeting of the Signal Recognition Particle Receptor., Karniel A, Mrusek D, Steinchen W, Dym O, Bange G, Bibi E, J Mol Biol. 2018 Apr 25. pii: S0022-2836(18)30270-5. doi:, 10.1016/j.jmb.2018.04.017. PMID:29704493
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (183 Kb) [Save to disk]
  • Biological Unit Coordinates (6fqd.pdb1.gz) 89 Kb
  • Biological Unit Coordinates (6fqd.pdb2.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 6FQD
  • CSU: Contacts of Structural Units for 6FQD
  • Structure Factors (316 Kb)
  • Retrieve 6FQD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6FQD from S2C, [Save to disk]
  • View 6FQD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6FQD
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6fqd_A] [6fqd_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6FQD
  • Community annotation for 6FQD at PDBWiki (http://pdbwiki.org)

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