6FWY Unknown Function date Mar 07, 2018
title Thioester Domain Of The Enterococcus Faecium Tie86 Protein
authors O.K.Miller, M.J.Banfield, U.Schwarz-Linek
compound source
Molecule: B-Type Cna Protein
Chain: A, B, C, D
Engineered: Yes
 Organism_scientific: Enterococcus Faecium
Organism_common: Streptococcus Faecium
Organism_taxid: 1352
Gene: B4w81_16995, Bta13_08335, Dtpha_1402599
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pehistev
symmetry Space Group: C 1 2 1
R_factor 0.233 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
197.700 33.732 206.052 90.00 105.88 90.00
method X-Ray Diffractionresolution 2.14 Å
ligand GOL, PG4 enzyme
Primary referenceA new structural class of bacterial thioester domains reveals a slipknot topology., Miller OK, Banfield MJ, Schwarz-Linek U, Protein Sci. 2018 Jul 27. doi: 10.1002/pro.3478. PMID:30052296
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (365 Kb) [Save to disk]
  • Biological Unit Coordinates (6fwy.pdb1.gz) 93 Kb
  • Biological Unit Coordinates (6fwy.pdb2.gz) 93 Kb
  • Biological Unit Coordinates (6fwy.pdb3.gz) 91 Kb
  • Biological Unit Coordinates (6fwy.pdb4.gz) 93 Kb
  • LPC: Ligand-Protein Contacts for 6FWY
  • CSU: Contacts of Structural Units for 6FWY
  • Structure Factors (2964 Kb)
  • Retrieve 6FWY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6FWY from S2C, [Save to disk]
    • View 6FWY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6FWY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6fwy_B] [6fwy_A] [6fwy_C] [6fwy_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6FWY
  • Community annotation for 6FWY at PDBWiki (http://pdbwiki.org)

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