6FX6 Unknown Function date Mar 08, 2018
title Thioester Domain Of The Staphylococcus Aureus Tie Protein
authors O.K.Miller, M.J.Banfield, U.Schwarz-Linek
compound source
Molecule: Satie-Ted
Chain: A
Engineered: Yes
 Organism_scientific: Staphylococcus Aureus
Organism_taxid: 1280
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pehistev
symmetry Space Group: P 21 21 21
R_factor 0.202 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.029 73.612 74.651 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.25 Å
ligand ACT, MSE, ZN enzyme
Primary referenceA new structural class of bacterial thioester domains reveals a slipknot topology., Miller OK, Banfield MJ, Schwarz-Linek U, Protein Sci. 2018 Jul 27. doi: 10.1002/pro.3478. PMID:30052296
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk]
  • Biological Unit Coordinates (6fx6.pdb1.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 6FX6
  • CSU: Contacts of Structural Units for 6FX6
  • Structure Factors (474 Kb)
  • Retrieve 6FX6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6FX6 from S2C, [Save to disk]
    • View 6FX6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6FX6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6fx6_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6FX6
  • Community annotation for 6FX6 at PDBWiki (http://pdbwiki.org)

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