OCA Atlas for 6G90

6G90

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

PSU, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
A
B
C
D
E
F
G
H
J
O
P
Q
R
S
T
U
V
W
Y
Z
d, v
f, x
g, y
s, b
t, h
u, i
w, e

Primary reference

Prespliceosome structure provides insights into spliceosome assembly and regulation., Plaschka C, Lin PC, Charenton C, Nagai K, Nature. 2018 Jul;559(7714):419-422. doi: 10.1038/s41586-018-0323-8. Epub 2018 Jul, 11. PMID:29995849

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1233 Kb) [Save to disk]

Biological Unit Coordinates (6g90.pdb1.gz) 1207 Kb

LPC: Ligand-Protein Contacts for 6G90

CSU: Contacts of Structural Units for 6G90

Retrieve 6G90 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 6G90 from S2C, [Save to disk]

View 6G90 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6g90_1] [6g90_2] [6g90_A] [6g90_B] [6g90_C] [6g90_D] [6g90_E] [6g90_F] [6g90_G] [6g90_H] [6g90_I] [6g90_J] [6g90_O] [6g90_P] [6g90_Q] [6g90_R] [6g90_S] [6g90_T] [6g90_U] [6g90_V] [6g90_W] [6g90_X] [6g90_Y] [6g90_Z] [6g90_b] [6g90_d] [6g90_e] [6g90_f] [6g90_g] [6g90_h] [6g90_i] [6g90_s] [6g90_t] [6g90_u] [6g90_v] [6g90_w] [6g90_x] [6g90_y]

SWISS-PROT database:

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