6GB1	Peptide Binding Protein	date	Apr 13, 2018
title	Crystal Structure Of The Glp1 Receptor Ecd With Peptide 11
authors	H.A.Schreuder, A.Liesum
compound		source
Molecule: Glucagon-Like Peptide 1 Receptor Chain: A Synonym: Glp-1r Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Glp1r Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_plasmid: Pd14
Molecule: Peptide 11 Chain: B Engineered: Yes Other_details: N-Terminally Truncated Dual Glucagon-Like Pe (Glp-1)Glucagon Receptor Agonist		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: P 43 21 2	R_factor 0.205 R_Free 0.262
crystal cell	length a length b length c angle alpha angle beta angle gamma 55.550 55.550 138.830 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.73 Å
ligand	AIB, HEZ, NH2, SO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Dual Glucagon-like Peptide 1 (GLP-1)/Glucagon Receptor Agonists Specifically Optimized for Multi-dose Formulations., Evers A, Bossart M, Pfeiffer-Marek S, Elvert R, Schreuder HA, Kurz M, Stengelin S, Lorenz M, Herling A, Konkar AA, Lukasczyk U, Pfenninger A, Lorenz K, Haack T, Kadereit D, Wagner M, J Med Chem. 2018 Jun 7. doi: 10.1021/acs.jmedchem.8b00292. PMID:29879354

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk] Biological Unit Coordinates (6gb1.pdb1.gz) 24 Kb LPC: Ligand-Protein Contacts for 6GB1 CSU: Contacts of Structural Units for 6GB1 Structure Factors (313 Kb) Retrieve 6GB1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6GB1 from S2C, [Save to disk]

View 6GB1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6GB1

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1l6gb1, region B:2-11,B:245-383 [Jmol] [rasmolscript] [script source]     - Domain d1h6gb1, region B:392-507 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6gb1_B] [6gb1_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6GB1

Community annotation for 6GB1 at PDBWiki (http://pdbwiki.org)

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