6GDR		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	AMP, PO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	DNA binding with a minimal scaffold: structure-function analysis of Lig E DNA ligases., Williamson A, Grgic M, Leiros HS, Nucleic Acids Res. 2018 Jul 11. pii: 5051839. doi: 10.1093/nar/gky622. PMID:30007325

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk] Biological Unit Coordinates (6gdr.pdb1.gz) 108 Kb LPC: Ligand-Protein Contacts for 6GDR CSU: Contacts of Structural Units for 6GDR Structure Factors (490 Kb) Retrieve 6GDR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6GDR from S2C, [Save to disk]

View 6GDR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6gdr_A] [6gdr_B] [6gdr_C] [6gdr_D] SWISS-PROT database:

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