6GFW | Transcription | date | May 02, 2018 |
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title | Cryo-Em Structure Of Bacterial Rna Polymerase-Sigma54 Holoen Initial Transcribing Complex | ||||||||||||||||||||||||||
authors | R.Glyde, F.Z.Ye, X.D.Zhang | ||||||||||||||||||||||||||
compound | source | ||||||||||||||||||||||||||
Molecule: Dna-Directed Rna Polymerase Subunit Alpha Chain: A, B Synonym: Rnap Subunit Alpha,Rna Polymerase Subunit Alpha, Transcriptase Subunit Alpha; Ec: 2.7.7.6 Engineered: Yes |
Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Gene: Rpoa, Pez, Phs, Sez, B3295, Jw3257 Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag Expression_system_taxid: 866768 Expression_system_vector_type: Pgem | ||||||||||||||||||||||||||
Molecule: Dna-Directed Rna Polymerase Subunit Beta Chain: C Synonym: Rnap Subunit Beta,Rna Polymerase Subunit Beta,Tran Subunit Beta; Ec: 2.7.7.6 Engineered: Yes |
Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Gene: Rpob, Gron, Nitb, Rif, Ron, Stl, Stv, Tabd, B3987, Jw Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag Expression_system_taxid: 866768 Expression_system_vector_type: Pgem | ||||||||||||||||||||||||||
Molecule: Dna-Directed Rna Polymerase Subunit Beta' Chain: D Synonym: Rnap Subunit Beta',Rna Polymerase Subunit Beta', Transcriptase Subunit Beta'; Ec: 2.7.7.6 Engineered: Yes |
Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Gene: Rpoc, Tabb, B3988, Jw3951 Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag Expression_system_taxid: 866768 Expression_system_vector_type: Pgem | ||||||||||||||||||||||||||
Molecule: Dna-Directed Rna Polymerase Subunit Omega Chain: E Synonym: Rnap Omega Subunit,Rna Polymerase Omega Subunit, Transcriptase Subunit Omega; Ec: 2.7.7.6 Engineered: Yes |
Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Gene: Rpoz, B3649, Jw3624 Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag Expression_system_taxid: 866768 Expression_system_vector_type: Pacyc-Duet1 | ||||||||||||||||||||||||||
Molecule: Nifh Promoter Template Dna Chain: F Engineered: Yes |
Synthetic: Yes Organism_scientific: Klebsiella Pneumoniae Organism_taxid: 573 | ||||||||||||||||||||||||||
Molecule: Nifh Promoter Non-Template Dna Chain: G Engineered: Yes |
Synthetic: Yes Organism_scientific: Klebsiella Pneumoniae Organism_taxid: 573 | ||||||||||||||||||||||||||
Molecule: Rna Polymerase Sigma-54 Factor Chain: M Ec: 2.7.7.6 Engineered: Yes Mutation: Yes |
Organism_scientific: Klebsiella Pneumoniae Organism_taxid: 573 Gene: Sm87_03359, Cp995_28845 Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag Expression_system_taxid: 866768 Expression_system_vector_type: Pet28b Expression_system_plasmid: Pet28b-Sigma54 | ||||||||||||||||||||||||||
Molecule: De Novo Synthesized Rna Chain: R Engineered: Yes Other_details: Uggg |
Organism_scientific: Escherichia Coli K-12 Organism_taxid: 83333 Expression_system: Escherichia Coli K-12 Expression_system_taxid: 83333 | ||||||||||||||||||||||||||
symmetry | Space Group: P 1 |
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crystal cell |
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method | Electron Microscopy | resolution | 3.70 Å | ||||||||||||||||||||||||
ligand | enzyme | Transferase E.C.2.7.7.6 BRENDA | |||||||||||||||||||||||||
Gene Ontology |
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Primary reference | Structures of Bacterial RNA Polymerase Complexes Reveal the Mechanism of DNA Loading and Transcription Initiation., Glyde R, Ye F, Jovanovic M, Kotta-Loizou I, Buck M, Zhang X, Mol Cell. 2018 Jun 21;70(6):1111-1120.e3. doi: 10.1016/j.molcel.2018.05.021. PMID:29932903 |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |