6GPW Chaperone date Jun 07, 2018
title Structure Of Human Heat Shock Protein 90-Alpha N-Terminal Do (Hsp90-Ntd)
authors G.Tassone, C.Pozzi, S.Mangani, M.Botta
compound source
Molecule: Heat Shock Protein Hsp 90-Alpha
Chain: A
Synonym: Heat Shock 86 Kda,Hsp86,Lipopolysaccharide-Associa Protein 2,Lps-Associated Protein 2,Renal Carcinoma Antigen
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hsp90aa1, Hsp90a, Hspc1, Hspca
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28b
symmetry Space Group: I 2 2 2
R_factor 0.167 R_Free 0.199
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.040 88.890 100.050 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand CL, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceProbing the role of Arg97 in Heat shock protein 90 N-terminal domain from the parasite Leishmania braziliensis through site-directed mutagenesis on the human counterpart., Tassone G, Mangani S, Botta M, Pozzi C, Biochim Biophys Acta Proteins Proteom. 2018 Sep 21. pii: S1570-9639(18)30153-5., doi: 10.1016/j.bbapap.2018.09.005. PMID:30248409
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (6gpw.pdb1.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 6GPW
  • CSU: Contacts of Structural Units for 6GPW
  • Structure Factors (1062 Kb)
  • Retrieve 6GPW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6GPW from S2C, [Save to disk]
  • View 6GPW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6GPW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6gpw_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6GPW
  • Community annotation for 6GPW at PDBWiki (http://pdbwiki.org)

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