6H07 Oxidoreductase date Jul 06, 2018
title X-Ray Structure Of Lactobacillus Brevis Alcohol Dehydrogenas
authors J.Hermann, P.Nowotny, P.Biggel, S.Schneider, D.Hekmat, D.Weuster-
compound source
Molecule: R-Specific Alcohol Dehydrogenase
Chain: A, B
Engineered: Yes
 Organism_scientific: Lactobacillus Brevis
Organism_taxid: 1580
Gene: Radh
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet28a(+)
symmetry Space Group: P 21 2 21
R_factor 0.180 R_Free 0.203
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.030 83.310 114.380 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.48 Å
ligand MG, MN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceNeutron and X-ray crystal structures of Lactobacillus brevis alcohol dehydrogenase reveal new insights into hydrogen-bonding pathways., Hermann J, Nowotny P, Schrader TE, Biggel P, Hekmat D, Weuster-Botz D, Acta Crystallogr F Struct Biol Commun. 2018 Dec 1;74(Pt 12):754-764. doi:, 10.1107/S2053230X18015273. Epub 2018 Nov 26. PMID:30511668
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (6h07.pdb1.gz) 165 Kb
  • LPC: Ligand-Protein Contacts for 6H07
  • CSU: Contacts of Structural Units for 6H07
  • Structure Factors (2194 Kb)
  • Retrieve 6H07 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6H07 from S2C, [Save to disk]
    • View 6H07 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6H07
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6h07_A] [6h07_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6H07
  • Community annotation for 6H07 at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science