6HSN Structural Protein date Oct 01, 2018
title Crystal Structure Of The Ternary Complex Of Gephe-Adp-Gaba(A Derived Peptide
authors V.B.Kasaragod, H.Schindelin
compound source
Molecule: Gephyrin
Chain: A
Synonym: Putative Glycine Receptor-Tubulin Linker Protein
Ec: 2.7.7.75,2.10.1.1
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
Gene: Gphn, Gph
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Gamma-Aminobutyric Acid Receptor Subunit Alpha-3
Chain: D, E
Synonym: Gaba(A) Receptor Subunit Alpha-3
Engineered: Yes

Synthetic: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
symmetry Space Group: I 2 2 2
R_factor 0.159 R_Free 0.196
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.962 99.217 111.608 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.55 Å
ligand 3F8, ACT, ADP, MG, MPD, NA, PO4 enzyme Transferase E.C.2.7.7.75 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceElucidating the Molecular Basis for Inhibitory Neurotransmission Regulation by Artemisinins., Kasaragod VB, Hausrat TJ, Schaefer N, Kuhn M, Christensen NR, Tessmer I, Maric HM, Madsen KL, Sotriffer C, Villmann C, Kneussel M, Schindelin H, Neuron. 2019 Jan 15. pii: S0896-6273(19)30002-9. doi:, 10.1016/j.neuron.2019.01.001. PMID:30704910
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk]
  • Biological Unit Coordinates (6hsn.pdb1.gz) 313 Kb
  • LPC: Ligand-Protein Contacts for 6HSN
  • CSU: Contacts of Structural Units for 6HSN
  • Structure Factors (2798 Kb)
  • Retrieve 6HSN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6HSN from S2C, [Save to disk]
  • View 6HSN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6HSN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6hsn from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6hsn_E] [6hsn_D] [6hsn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6HSN
  • Community annotation for 6HSN at PDBWiki (http://pdbwiki.org)

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