6HXG	Plant Protein	date	Oct 17, 2018
title	Pdx1.2pdx1.3 Complex (Intermediate)
authors	G.C.Robinson, M.Kaufmann, C.Roux, J.Martinez-Font, M.Hothorn, S.T T.B.Fitzpatrick
compound		source
Molecule: Pyridoxal 5'-Phosphate Synthase-Like Subunit Pdx1 Chain: A, C, E, G Synonym: Atpdx1;3 Engineered: Yes		Organism_scientific: Arabidopsis Thaliana Organism_common: Mouse-Ear Cress Organism_taxid: 3702 Gene: Pdx12, A37, Pdx1l2, At3g16050, Msl1.3 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 Expression_system_variant: De3 (Ril) Expression_system_vector_type: Plasmid
Molecule: Pyridoxal 5'-Phosphate Synthase Subunit Pdx1.3 Chain: B, D, F, H Synonym: Plp Synthase Subunit Pdx1.3 Ec: 4.3.3.6 Engineered: Yes		Organism_scientific: Arabidopsis Thaliana Organism_common: Mouse-Ear Cress Organism_taxid: 3702 Gene: Pdx13, Gip2, Pdx1l3, Rsr4, At5g01410, T10o8.120 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_variant: Ril Expression_system_vector_type: Plasmid
symmetry	Space Group: H 3	R_factor 0.216 R_Free 0.231
crystal cell	length a length b length c angle alpha angle beta angle gamma 177.976 177.976 116.855 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	SO4	enzyme	Lyase E.C.4.3.3.6 BRENDA
Gene Ontology	Chain Function Process Component A, E, C, G F, B, H, D
Primary reference	Crystal structure of the pseudoenzyme PDX1.2 in complex with its cognate enzyme PDX1.3: a total eclipse., Robinson GC, Kaufmann M, Roux C, Martinez-Font J, Hothorn M, Thore S, Fitzpatrick TB, Acta Crystallogr D Struct Biol. 2019 Apr 1;75(Pt 4):400-415. doi:, 10.1107/S2059798319002912. Epub 2019 Apr 4. PMID:30988257

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (302 Kb) [Save to disk] Biological Unit Coordinates (6hxg.pdb1.gz) 872 Kb LPC: Ligand-Protein Contacts for 6HXG CSU: Contacts of Structural Units for 6HXG Structure Factors (5658 Kb) Retrieve 6HXG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6HXG from S2C, [Save to disk]

View 6HXG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6HXG

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6hxg_F] [6hxg_D] [6hxg_E] [6hxg_A] [6hxg_H] [6hxg_B] [6hxg_C] [6hxg_G] SWISS-PROT database: Domain organization of by SWISSPFAM

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Community annotation for 6HXG at PDBWiki (http://pdbwiki.org)

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