6J6Q		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GTP, IHP, MG, SEP, ZN	enzyme
Gene Ontology	Chain Function Process Component A metallopeptidase activity C F H U2-type catalytic step 2 spl... I U2-type catalytic step 1 spl... U2-type catalytic step 2 spl... J O P U2-type catalytic step 1 spl... U2-type catalytic step 2 spl... Q R U2-type catalytic step 1 spl... U2-type catalytic step 2 spl... S T Z a b c U2-type catalytic step 1 spl... d U2-type catalytic step 1 spl... U2-type catalytic step 2 spl... g, e k, s l, y n r, o, q, p U2-type catalytic step 1 spl... t U2-type catalytic step 1 spl... u, i v U2-type catalytic step 1 spl... U2-type catalytic step 2 spl... w, h x, j z, m
Primary reference	Structures of the Catalytically Activated Yeast Spliceosome Reveal the Mechanism of Branching., Wan R, Bai R, Yan C, Lei J, Shi Y, Cell. 2019 Apr 4;177(2):339-351.e13. doi: 10.1016/j.cell.2019.02.006. Epub 2019, Mar 14. PMID:30879786

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1521 Kb) [Save to disk] Biological Unit Coordinates (6j6q.pdb1.gz) 1457 Kb LPC: Ligand-Protein Contacts for 6J6Q CSU: Contacts of Structural Units for 6J6Q Retrieve 6J6Q in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6J6Q from S2C, [Save to disk]

View 6J6Q in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6J6Q

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 6j6q from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6j6q_Q] [6j6q_A] [6j6q_B] [6j6q_C] [6j6q_D] [6j6q_E] [6j6q_F] [6j6q_H] [6j6q_I] [6j6q_J] [6j6q_L] [6j6q_O] [6j6q_P] [6j6q_R] [6j6q_S] [6j6q_T] [6j6q_Z] [6j6q_a] [6j6q_b] [6j6q_c] [6j6q_d] [6j6q_e] [6j6q_g] [6j6q_h] [6j6q_i] [6j6q_j] [6j6q_k] [6j6q_l] [6j6q_m] [6j6q_n] [6j6q_o] [6j6q_p] [6j6q_q] [6j6q_r] [6j6q_s] [6j6q_t] [6j6q_u] [6j6q_v] [6j6q_w] [6j6q_x] [6j6q_y] [6j6q_z] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6J6Q

Community annotation for 6J6Q at PDBWiki (http://pdbwiki.org)

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