6JHU Ligase date Feb 19, 2019
title Crystal Structure Of Biotin Protein Ligase From Leishmania M Complex With Biotinyl-5-Amp
authors M.Rajak, A.Patel, M.Sundd
compound source
Molecule: Biotinlipoate Protein Ligase-Like Protein
Chain: A
Ec: 6.3.4.15
Engineered: Yes
Organism_scientific: Leishmania Major
Organism_taxid: 5664
Gene: Lmjf_31_1070
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: C 1 2 1
R_factor 0.217 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
116.848 46.621 54.573 90.00 104.57 90.00
method X-Ray Diffractionresolution 1.97 Å
ligand BT5, SO4 enzyme Ligase E.C.6.3.4.15 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (6jhu.pdb1.gz) 77 Kb
  • LPC: Ligand-Protein Contacts for 6JHU
  • CSU: Contacts of Structural Units for 6JHU
  • Structure Factors (310 Kb)
  • Retrieve 6JHU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6JHU from S2C, [Save to disk]
  • View 6JHU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6JHU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6jhu_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6JHU
  • Community annotation for 6JHU at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science