6KLY Cell Invasion date Jul 30, 2019
title Crystal Structure Of The Type III Effector Xopai From Xantho Axonopodis Pv. Citri In Space Group P43212
authors J.H.Liu, J.E.Wu, H.Lin, S.W.Chiu, J.Y.Yang
compound source
Molecule: Type III Effector Xopai
Chain: A
Engineered: Yes
Organism_scientific: Xanthomonas Citri
Organism_taxid: 346
Strain: Xw19
Gene: Xopai, Xac3230
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Ril+
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 43 21 2
R_factor 0.166 R_Free 0.195
crystal
cell
length a length b length c angle alpha angle beta angle gamma
73.050 73.050 114.060 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.01 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk]
  • Biological Unit Coordinates (6kly.pdb1.gz) 119 Kb
  • CSU: Contacts of Structural Units for 6KLY
  • Structure Factors (194 Kb)
  • Retrieve 6KLY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6KLY from S2C, [Save to disk]
  • View 6KLY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6KLY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6kly_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6KLY
  • Community annotation for 6KLY at PDBWiki (http://pdbwiki.org)

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