6KPC Membrane Protein date Aug 15, 2019
title Crystal Structure Of An Agonist Bound Gpcr
authors X.T.Li, T.Hua, L.J.Wu, A.Makriyannis, M.Wu, Z.J.Liu
compound source
Molecule: Cannabinoid Receptor 2,Endolysin
Chain: A
Synonym: Hcb2,Cx5,Lysis Protein,Lysozyme,Muramidase
Ec: 3.2.1.17
Engineered: Yes
Mutation: Yes
Other_details: Cb2, T4 Lysozyme, Cb2 Fusion,Cb2, T4 Lysozym Fusion,Cb2, T4 Lysozyme, Cb2 Fusion,Cb2, T4 Lysozyme, Cb2 F T4 Lysozyme, Cb2 Fusion,Cb2, T4 Lysozyme, Cb2 Fusion,Cb2, T Lysozyme, Cb2 Fusion,Cb2, T4 Lysozyme, Cb2 Fusion,Cb2, T4 L Cb2 Fusion,Cb2, T4 Lysozyme, Cb2 Fusion,Cb2, T4 Lysozyme, C Cb2, T4 Lysozyme, Cb2 Fusion,Cb2, T4 Lysozyme, Cb2 Fusion,C Lysozyme, Cb2 Fusion,Cb2, T4 Lysozyme, Cb2 Fusion,Cb2, T4 L Cb2 Fusion,Cb2, T4 Lysozyme, Cb2 Fusion,Cb2, T4 Lysozyme, C Cb2, T4 Lysozyme, Cb2 Fusion,Cb2, T4 Lysozyme, Cb2 Fusion,C Lysozyme, Cb2 Fusion,Cb2, T4 Lysozyme, Cb2 Fusion,Cb2, T4 L Cb2 Fusion,Cb2, T4 Lysozyme, Cb2 Fusion,Cb2, T4 Lysozyme, C Cb2, T4 Lysozyme, Cb2 Fusion,Cb2, T4 Lysozyme, Cb2 Fusion
Organism_scientific: Homo Sapiens, Enterobacteria Phage Rb5
Organism_common: Human
Organism_taxid: 9606, 697290
Gene: Cnr2, Cb2a, Cb2b, E, Rb59_126
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 21 21 21
R_factor 0.230 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
33.960 140.220 156.260 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.20 Å
ligand 8D0, E3R enzyme Hydrolase E.C.3.2.1.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (6kpc.pdb1.gz) 149 Kb
  • LPC: Ligand-Protein Contacts for 6KPC
  • CSU: Contacts of Structural Units for 6KPC
  • Structure Factors (107 Kb)
  • Retrieve 6KPC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6KPC from S2C, [Save to disk]
  • View 6KPC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6KPC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6kpc_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6KPC
  • Community annotation for 6KPC at PDBWiki (http://pdbwiki.org)

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