6LDQ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SCN enzyme
Primary referenceCo-crystal Structure of Thermosynechococcus elongatus Sucrose Phosphate Synthase With UDP and Sucrose-6-Phosphate Provides Insight Into Its Mechanism of Action Involving an Oxocarbenium Ion and the Glycosidic Bond., Li Y, Yao Y, Yang G, Tang J, Ayala GJ, Li X, Zhang W, Han Q, Yang T, Wang H, Mayo KH, Su J, Front Microbiol. 2020 May 26;11:1050. doi: 10.3389/fmicb.2020.01050. eCollection , 2020. PMID:32528448
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]
  • Biological Unit Coordinates (6ldq.pdb1.gz) 33 Kb
  • Biological Unit Coordinates (6ldq.pdb2.gz) 34 Kb
  • Biological Unit Coordinates (6ldq.pdb3.gz) 32 Kb
  • Biological Unit Coordinates (6ldq.pdb4.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 6LDQ
  • CSU: Contacts of Structural Units for 6LDQ
  • Structure Factors (1589 Kb)
  • Retrieve 6LDQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6LDQ from S2C, [Save to disk]
    • View 6LDQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ldq_A] [6ldq_B] [6ldq_C] [6ldq_D]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science