6LVN
Viral Protein
date
Feb 04, 2020
title
Structure Of The 2019-Ncov Hr2 Domain
authors
Y.Zhu, F.Sun
compound
source
Molecule
: Spike Protein S2'
Chain
: A, B, C, D
Fragment
: Hr2 Domain
Synonym
: Spike Protein S2
Engineered
: Yes
Organism_scientific
: Severe Acute Respiratory Syndrome Coro 2;
Organism_common
: 2019-Ncov
Organism_taxid
: 2697049
Gene
: S, 2
Expression_system
: Escherichia Coli
Expression_system_taxid
: 562
symmetry
Space Group
: P 21 21 21
R_factor
0.215
R_Free
0.258
crystal
cell
length a
length b
length c
angle alpha
angle beta
angle gamma
28.195
49.729
89.576
90.00
90.00
90.00
method
X-Ray Diffraction
resolution
2.47 Å
Data retrieval
Asymmetric unit, PDB entry:
[header only]
[complete with coordinates]
(48 Kb)
[Save to disk]
Biological Unit Coordinates
(6lvn.pdb1.gz) 43 Kb
CSU:
Contacts of Structural Units
for 6LVN
Structure Factors
(194 Kb)
Retrieve 6LVN in
mmCIF
format
[Save to disk]
SEQRES to COORDINATES
correlation for
6LVN
from
S2C
,
[Save to disk]
View 6LVN in 3D
Proteopedia
, because life has more than 2D.
On
Jmol
, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
On
FirstGlance
, an excellent tool for a guided tour on the structure components, by
E. Martz
.
Visual 3D analysis of 6LVN
Ramachandran
plot from
PDBSum
Structure-derived information
Dipole
moment, from
Dipole Server
at Weizmann Institute
Sequence-derived information
View one-letter amino acid or nucleotide sequence for each chain:
[6lvn_C]
[6lvn_D]
[6lvn_A]
[6lvn_B]
SWISS-PROT
database:
Domain
organization of by
SWISSPFAM
Other resources with information on 6LVN
Community annotation for
6LVN
at
PDBWiki
(http://pdbwiki.org)
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