6LXT	Viral Protein	date	Feb 11, 2020
title	Structure Of Post Fusion Core Of 2019-Ncov S2 Subunit
authors	Y.Zhu, F.Sun
compound		source
Molecule: Spike Protein S2, Spike Protein S2 Chain: A, B, C, D, E, F Fragment: Hr1 Domain,Hr2 Domain Engineered: Yes Other_details: The Fusion Protein Of Sars-Cov-2 S2 Subunit (Residues 910-988), Linker (Sggrgg), Sars-Cov-2 S2 Subunit (Residues 1162-1206), And Expression Tag (Gg)		Organism_scientific: Severe Acute Respiratory Syndrome Coro 2; Organism_common: 2019-Ncov Organism_taxid: 2697049 Gene: S, 2 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.259 R_Free 0.290
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.240 57.580 115.720 90.00 91.58 90.00
method	X-Ray Diffraction	resolution	2.90 Å
ligand	PG4, ZN	enzyme
Gene Ontology	Chain Function Process Component F, A, D, C, E, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (231 Kb) [Save to disk] Biological Unit Coordinates (6lxt.pdb1.gz) 115 Kb Biological Unit Coordinates (6lxt.pdb2.gz) 111 Kb LPC: Ligand-Protein Contacts for 6LXT CSU: Contacts of Structural Units for 6LXT Structure Factors (415 Kb) Retrieve 6LXT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6LXT from S2C, [Save to disk]

View 6LXT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6LXT

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 6lxt from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6lxt_A] [6lxt_E] [6lxt_B] [6lxt_C] [6lxt_F] [6lxt_D] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6LXT

Community annotation for 6LXT at PDBWiki (http://pdbwiki.org)

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