6M7M Protein Fibril date Aug 20, 2018
title Rac-Gststa From Degenerate Octameric Repeats In Inaz, Residu
authors C.Zee, C.Glynn, M.Gallagher-Jones, J.Miao, C.G.Santiago, D.Cascio M.R.Sawaya, J.A.Rodriguez
compound source
Molecule: L-Gststa From Ice Nucleation Protein, Inaz, And I Enantiomer, D-Gststa;
Chain: A
Fragment: Residues 707-712
Engineered: Yes
 Synthetic: Yes
Organism_scientific: Pseudomonas Syringae
Organism_taxid: 317
Other_details: Synthetic Peptide L-Gststa Corresponding To 707-712 Of Inaz, And Its Enantiomer, D-Gststa
symmetry Space Group: P 1 21/c 1
R_factor 0.199 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
15.230 9.290 21.060 90.00 108.23 90.00
method X-Ray Diffractionresolution 1.10 Å
Primary referenceHomochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ., Zee CT, Glynn C, Gallagher-Jones M, Miao J, Santiago CG, Cascio D, Gonen T, Sawaya MR, Rodriguez JA, IUCrJ. 2019 Jan 24;6(Pt 2):197-205. doi: 10.1107/S2052252518017621. eCollection, 2019 Mar 1. PMID:30867917
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (5 Kb) [Save to disk]
  • Biological Unit Coordinates (6m7m.pdb1.gz) 2 Kb
  • CSU: Contacts of Structural Units for 6M7M
  • Structure Factors (30 Kb)
  • Retrieve 6M7M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6M7M from S2C, [Save to disk]
    • View 6M7M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6M7M
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6m7m_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6M7M
  • Community annotation for 6M7M at PDBWiki (http://pdbwiki.org)

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