OCA Atlas for 6MRY

6MRY

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CL, EDO, FLC, I3C, PEG, PGE

enzyme

Gene
Ontology

Chain	Function	Process	Component
K, A, F, E, H, J, G, I, C, D, L, B

Primary reference

Structural and functional characterization of the membrane-permeabilizing activity of Nicotiana occidentalis defensin NoD173 and protein engineering to enhance oncolysis., Lay FT, Ryan GF, Caria S, Phan TK, Veneer PK, White JA, Kvansakul M, Hulett MD, FASEB J. 2019 Feb 22:fj201802540R. doi: 10.1096/fj.201802540R. PMID:30794440

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (202 Kb) [Save to disk]

Biological Unit Coordinates (6mry.pdb1.gz) 34 Kb

Biological Unit Coordinates (6mry.pdb2.gz) 36 Kb

Biological Unit Coordinates (6mry.pdb3.gz) 35 Kb

Biological Unit Coordinates (6mry.pdb4.gz) 35 Kb

Biological Unit Coordinates (6mry.pdb5.gz) 36 Kb

Biological Unit Coordinates (6mry.pdb6.gz) 35 Kb

LPC: Ligand-Protein Contacts for 6MRY

CSU: Contacts of Structural Units for 6MRY

Structure Factors (1314 Kb)

Retrieve 6MRY in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 6MRY from S2C, [Save to disk]

View 6MRY in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6mry_A] [6mry_B] [6mry_C] [6mry_D] [6mry_E] [6mry_F] [6mry_G] [6mry_H] [6mry_I] [6mry_J] [6mry_K] [6mry_L]

SWISS-PROT database:

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