6NB6	Virus	date	Dec 06, 2018
title	Sars-Cov Complex With Human Neutralizing S230 Antibody Fab F (State 1)
authors	A.C.Walls, X.Xiong, Y.J.Park, M.A.Tortorici, S.Snijder, J.Quispe, E.Cameroni, R.Gopal, D.Mian, A.Lanzavecchia, M.Zambon, F.A.Rey, D D.Veesler, Seattle Structural Genomics Center For Infectious (Ssgcid)
compound		source
Molecule: Spike Glycoprotein Chain: A, B, C Synonym: S Glycoprotein,E2,Peplomer Protein Engineered: Yes		Organism_scientific: Sars Coronavirus Organism_common: Sars-Cov Organism_taxid: 227859 Gene: S, 2 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606
Molecule: S230 Heavy Chain Chain: H, I Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606
Molecule: S230 Light Chain Chain: L, M Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	4.20 Å
ligand	BMA, MAN, NAG	enzyme
Gene Ontology	Chain Function Process Component A, C, B
Primary reference	Unexpected Receptor Functional Mimicry Elucidates Activation of Coronavirus Fusion., Walls AC, Xiong X, Park YJ, Tortorici MA, Snijder J, Quispe J, Cameroni E, Gopal R, Dai M, Lanzavecchia A, Zambon M, Rey FA, Corti D, Veesler D, Cell. 2019 Jan 23. pii: S0092-8674(18)31642-8. doi: 10.1016/j.cell.2018.12.028. PMID:30712865

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (538 Kb) [Save to disk] Biological Unit Coordinates (6nb6.pdb1.gz) 512 Kb LPC: Ligand-Protein Contacts for 6NB6 CSU: Contacts of Structural Units for 6NB6 Retrieve 6NB6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6NB6 from S2C, [Save to disk]

View 6NB6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6NB6

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6nb6_B] [6nb6_C] [6nb6_H] [6nb6_L] [6nb6_A] [6nb6_M] [6nb6_I] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6NB6

Community annotation for 6NB6 at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---