6NI3 Signaling Protein Immune System date Dec 26, 2018
title B2v2r-Gs Protein Subcomplex Of A Gpcr-G Protein-Beta-Arresti Complex
authors A.H.Nguyen, A.R.B.Thomsen, T.J.Cahill, A.Des Georges, R.J.Lefkow
compound source
Molecule: Guanine Nucleotide-Binding Protein G(S) Subunit A Isoforms Short;
Chain: A
Synonym: Adenylate Cyclase-Stimulating G Alpha Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gnas, Gnas1, Gsp
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111

Molecule: Guanine Nucleotide-Binding Protein G(I)G(S)G(T) Beta-1;
Chain: B
Synonym: Transducin Beta Chain 1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gnb1
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111

Molecule: Guanine Nucleotide-Binding Protein G(I)G(S)G(O) Gamma-2;
Chain: G
Synonym: G Gamma-I
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gng2
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111

Molecule: Endolysin,Beta-2 Adrenergic Receptor Chimera
Chain: R
Synonym: Lysis Protein,Lysozyme,Muramidase,Beta-2 Adrenorec Beta-2 Adrenoceptor;
Ec: 3.2.1.17
Engineered: Yes

Organism_scientific: Enterobacteria Phage Rb59, Homo Sapien
Organism_common: Human
Organism_taxid: 697290, 9606
Gene: E, Rb59_126, Adrb2, Adrb2r, B2ar
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108

Molecule: Nanobody 35
Chain: N
Engineered: Yes

Organism_scientific: Lama Glama
Organism_common: Llama
Organism_taxid: 9844
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.80 Å
ligand P0G enzyme Hydrolase E.C.3.2.1.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B
  • G-protein coupled acetylchol...

  • G


    R


    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (200 Kb) [Save to disk]
  • Biological Unit Coordinates (6ni3.pdb1.gz) 194 Kb
  • LPC: Ligand-Protein Contacts for 6NI3
  • CSU: Contacts of Structural Units for 6NI3
  • Retrieve 6NI3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6NI3 from S2C, [Save to disk]
  • View 6NI3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6NI3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ni3_G] [6ni3_B] [6ni3_R] [6ni3_A] [6ni3_N]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6NI3
  • Community annotation for 6NI3 at PDBWiki (http://pdbwiki.org)

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