6NS1 Cell Adhesion date Jan 24, 2019
title Crystal Structure Of Dip-Gamma Ig1+Ig2
authors S.Cheng, Y.J.Park, J.D.Kurleto, E.Ozkan
compound source
Molecule: Dpr-Interacting Protein Gamma
Chain: A
Synonym: Gh08175p
Engineered: Yes
 Organism_scientific: Drosophila Melanogaster
Organism_common: Fruit Fly
Organism_taxid: 7227
Gene: Dip-Gamma, 14521, Anon-Wo0140519.196, Ct34248, Dmel\C Cg14521, Dmel_cg14521;
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
Expression_system_cell_line: High Five Cells
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 1 21 1
R_factor 0.205 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
29.330 43.440 86.140 90.00 90.46 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand FUC, NAG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (6ns1.pdb1.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 6NS1
  • CSU: Contacts of Structural Units for 6NS1
  • Structure Factors (164 Kb)
  • Retrieve 6NS1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6NS1 from S2C, [Save to disk]
    • View 6NS1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6NS1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ns1_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6NS1
  • Community annotation for 6NS1 at PDBWiki (http://pdbwiki.org)

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