6O5O Endocytosis date Mar 04, 2019
title Crystal Structure Of The Disabled-2 (Dab2) Dab Homology Doma Complex With Peptide Sta02
authors M.Chavez, D.R.Madden
compound source
Molecule: Disabled Homolog 2
Chain: A, B
Synonym: Adaptor Molecule Disabled-2,Differentially Express Ovarian Carcinoma 2,Doc-2,Differentially-Expressed Protein
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dab2, Doc2
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Ace-Qngfdnpnyqpqenmqa
Chain: C, D
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 3 2 1
R_factor 0.173 R_Free 0.199
crystal
cell
length a length b length c angle alpha angle beta angle gamma
102.724 102.724 80.831 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.75 Å
ligand ACE, MG, NI enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (6o5o.pdb1.gz) 33 Kb
  • Biological Unit Coordinates (6o5o.pdb2.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 6O5O
  • CSU: Contacts of Structural Units for 6O5O
  • Structure Factors (1182 Kb)
  • Retrieve 6O5O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6O5O from S2C, [Save to disk]
    • View 6O5O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6O5O
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6o5o_C] [6o5o_B] [6o5o_D] [6o5o_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6O5O
  • Community annotation for 6O5O at PDBWiki (http://pdbwiki.org)

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