6OR1 Transcription date Apr 29, 2019
title Human Lrh-1 Bound To The Agonist 2n And A Fragment Of The Ti Coregulator
authors S.G.Mays, E.A.Ortlund
compound source
Molecule: Nuclear Receptor Subfamily 5 Group A Member 2
Chain: A
Fragment: Unp Residues 299-541
Synonym: Alpha-1-Fetoprotein Transcription Factor,B1-Bindin Hb1f,Cyp7a Promoter-Binding Factor,Hepatocytic Transcriptio Liver Receptor Homolog 1,Lrh-1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nr5a2, B1f, Cpf, Ftf
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Nuclear Receptor Coactivator 2
Chain: C
Fragment: Unp Residues 740-754
Synonym: Ncoa-2,Class E Basic Helix-Loop-Helix Protein 75,B Transcriptional Intermediary Factor 2,Htif2;
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 43 21 2
R_factor 0.200 R_Free 0.239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.658 46.658 222.696 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.17 Å
ligand N27 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (131 Kb) [Save to disk]
  • Biological Unit Coordinates (6or1.pdb1.gz) 125 Kb
  • LPC: Ligand-Protein Contacts for 6OR1
  • CSU: Contacts of Structural Units for 6OR1
  • Structure Factors (74 Kb)
  • Retrieve 6OR1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6OR1 from S2C, [Save to disk]
  • View 6OR1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6OR1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6or1_A] [6or1_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6OR1
  • Community annotation for 6OR1 at PDBWiki (http://pdbwiki.org)

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