6OTZ Transferase Dna date May 03, 2019
title Structure Of Hiv-1 Reverse Transcriptase (Rt) In Complex Wit And (+)Ftc-Tp
authors N.Bertoletti, K.S.Anderson
compound source
Molecule: Reverse Transcriptaseribonuclease H
Chain: A
Synonym: P66 Rt
Ec: 2.7.7.49, 2.7.7.7, 3.1.26.13
Engineered: Yes
Mutation: Yes
 Organism_scientific: Human Immunodeficiency Virus Type 1 Gr Subtype B (Isolate Hxb2);
Organism_common: Hiv-1
Organism_taxid: 11706
Strain: Isolate Hxb2
Gene: Gag-Pol
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693

Molecule: P51 Rt
Chain: B
Engineered: Yes
Mutation: Yes
Organism_scientific: Human Immunodeficiency Virus Type 1 Gr Subtype B (Isolate Hxb2);
Organism_common: Hiv-1
Organism_taxid: 11706
Strain: Isolate Hxb2
Gene: Gag-Pol
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693

Molecule: Dna Primer 20-Mer
Chain: P
Engineered: Yes
Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630

Molecule: Dna Template 27-Mer
Chain: T
Engineered: Yes
Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
symmetry Space Group: C 2 2 21
R_factor 0.198 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
167.069 170.368 103.188 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.86 Å
ligand DDG, G47, GOL, MG, N8G, SO4 enzyme Transferase E.C.2.7.7.49 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (358 Kb) [Save to disk]
  • Biological Unit Coordinates (6otz.pdb1.gz) 348 Kb
  • LPC: Ligand-Protein Contacts for 6OTZ
  • CSU: Contacts of Structural Units for 6OTZ
  • Structure Factors (218 Kb)
  • Retrieve 6OTZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6OTZ from S2C, [Save to disk]
    • View 6OTZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6OTZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6otz_A] [6otz_P] [6otz_T] [6otz_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6OTZ
  • Community annotation for 6OTZ at PDBWiki (http://pdbwiki.org)

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