6OZE Hydrolase date May 15, 2019
title Crystal Structure Of The Catalytic Domain Of Human Endonucle (C140sc225sc226ac228s)
authors N.L.Samara, W.Yang
compound source
Molecule: Endonuclease V
Chain: A
Synonym: Hendov,Inosine-Specific Endoribonuclease
Ec: 3.1.26.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Endov
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 31
R_factor 0.172 R_Free 0.191
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.949 50.949 102.978 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.50 Å
ligand ACT, GOL, NA enzyme Hydrolase E.C.3.1.26 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk]
  • Biological Unit Coordinates (6oze.pdb1.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 6OZE
  • CSU: Contacts of Structural Units for 6OZE
  • Structure Factors (1117 Kb)
  • Retrieve 6OZE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6OZE from S2C, [Save to disk]
  • View 6OZE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6OZE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6oze_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6OZE
  • Community annotation for 6OZE at PDBWiki (http://pdbwiki.org)

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