6PW0 Oxidoreductase date Jul 21, 2019
title Cytochrome C Oxidase Delta 6 Mutant
authors J.Liu, S.Ferguson-Miller
compound source
Molecule: Cytochrome C Oxidase Subunit 1
Chain: A, C
Ec: 1.9.3.1
Engineered: Yes
Mutation: Yes
 Organism_scientific: Rhodobacter Sphaeroides 2.4.1
Organism_taxid: 272943
Strain: Atcc 17023 2.4.1 Ncib 8253 Dsm 158
Gene: Coxi, Rsp_1877
Expression_system: Rhodobacter Sphaeroides 2.4.1
Expression_system_taxid: 272943

Molecule: Cytochrome C Oxidase Subunit 2
Chain: B, D
Ec: 1.9.3.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Rhodobacter Sphaeroides 2.4.1
Organism_taxid: 272943
Strain: Atcc 17023 2.4.1 Ncib 8253 Dsm 158
Gene: Coxii, Rsp_1826
Expression_system: Rhodobacter Sphaeroides 2.4.1
Expression_system_taxid: 272943
symmetry Space Group: P 21 21 21
R_factor 0.173 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
124.905 131.477 176.601 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand CA, CD, CU, DMU, GLC, HEA, HTH, MG, OH, TRD, TRS enzyme Oxidoreductase E.C.1.9.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C
  • cytochrome-c oxidase activit...


    • D, B
  • cytochrome-c oxidase activit...


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (283 Kb) [Save to disk]
  • Biological Unit Coordinates (6pw0.pdb1.gz) 140 Kb
  • Biological Unit Coordinates (6pw0.pdb2.gz) 134 Kb
  • LPC: Ligand-Protein Contacts for 6PW0
  • CSU: Contacts of Structural Units for 6PW0
  • Structure Factors (3638 Kb)
  • Retrieve 6PW0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6PW0 from S2C, [Save to disk]
    • View 6PW0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6PW0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6pw0_A] [6pw0_B] [6pw0_C] [6pw0_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6PW0
  • Community annotation for 6PW0 at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science