6QGA Hydrolase date Jan 10, 2019
title Crystal Structure Of Ideonella Sakaiensis Mhetase Bound To T Hydrolyzable Ligand Mheta
authors G.J.Palm, L.Reisky, D.Boettcher, H.Mueller, E.A.P.Michels, C.Walc L.Berndt, M.S.Weiss, U.T.Bornscheuer, G.Weber
compound source
Molecule: Mono(2-Hydroxyethyl) Terephthalate Hydrolase
Chain: A, B, C, D, E, F
Synonym: Mhetase
Ec: 3.1.1.102
Engineered: Yes
Organism_scientific: Ideonella Sakaiensis
Organism_taxid: 1547922
Gene: Isf6_0224
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768
symmetry Space Group: P 21 21 21
R_factor 0.173 R_Free 0.198
crystal
cell
length a length b length c angle alpha angle beta angle gamma
112.153 183.646 246.752 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand CA, CL, J1K, MPD, SO4 enzyme Hydrolase E.C.3.1.1.102 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceStructure of the plastic-degrading Ideonella sakaiensis MHETase bound to a substrate., Palm GJ, Reisky L, Bottcher D, Muller H, Michels EAP, Walczak MC, Berndt L, Weiss MS, Bornscheuer UT, Weber G, Nat Commun. 2019 Apr 12;10(1):1717. doi: 10.1038/s41467-019-09326-3. PMID:30979881
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1072 Kb) [Save to disk]
  • Biological Unit Coordinates (6qga.pdb1.gz) 184 Kb
  • Biological Unit Coordinates (6qga.pdb2.gz) 184 Kb
  • Biological Unit Coordinates (6qga.pdb3.gz) 182 Kb
  • Biological Unit Coordinates (6qga.pdb4.gz) 183 Kb
  • Biological Unit Coordinates (6qga.pdb5.gz) 185 Kb
  • Biological Unit Coordinates (6qga.pdb6.gz) 184 Kb
  • LPC: Ligand-Protein Contacts for 6QGA
  • CSU: Contacts of Structural Units for 6QGA
  • Structure Factors (1839 Kb)
  • Retrieve 6QGA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6QGA from S2C, [Save to disk]
  • View 6QGA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6QGA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6qga_C] [6qga_D] [6qga_B] [6qga_A] [6qga_F] [6qga_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6QGA
  • Community annotation for 6QGA at PDBWiki (http://pdbwiki.org)

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