6QX2 3.4A structure of benzoisoxazole 3 with S.aureus DNA gyrase and DNA date
authors Bax, B.D.
compound source
symmetry
R_factor
R_Free 0.20834
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.40
ligand JK8 enzyme
Gene
Ontology
ChainFunctionProcessComponent
S, K, d, u, k, M, m, s, B, D, b, U


r, a, T, j, C, L, t, A, J, l, c, R


Primary referenceStructure-guided design of antibacterials that allosterically inhibit DNA gyrase., Thalji RK, Raha K, Andreotti D, Checchia A, Cui H, Meneghelli G, Profeta R, Tonelli F, Tommasi S, Bakshi T, Donovan BT, Howells A, Jain S, Nixon C, Quinque G, McCloskey L, Bax BD, Neu M, Chan PF, Stavenger RA, Bioorg Med Chem Lett. 2019 Mar 22. pii: S0960-894X(19)30168-4. doi:, 10.1016/j.bmcl.2019.03.029. PMID:30962087
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1395 Kb) [Save to disk]
  • Biological Unit Coordinates (6qx2.pdb1.gz) 244 Kb
  • Biological Unit Coordinates (6qx2.pdb2.gz) 243 Kb
  • Biological Unit Coordinates (6qx2.pdb3.gz) 243 Kb
  • Biological Unit Coordinates (6qx2.pdb4.gz) 239 Kb
  • Biological Unit Coordinates (6qx2.pdb5.gz) 242 Kb
  • Biological Unit Coordinates (6qx2.pdb6.gz) 244 Kb
  • LPC: Ligand-Protein Contacts for 6QX2
  • CSU: Contacts of Structural Units for 6QX2
  • Structure Factors (3068 Kb)
  • Retrieve 6QX2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6QX2 from S2C, [Save to disk]
  • View 6QX2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6QX2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6qx2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6qx2_N] [6qx2_O] [6qx2_r] [6qx2_U] [6qx2_C] [6qx2_e] [6qx2_V] [6qx2_u] [6qx2_v] [6qx2_d] [6qx2_R] [6qx2_A] [6qx2_B] [6qx2_M] [6qx2_b] [6qx2_F] [6qx2_f] [6qx2_m] [6qx2_T] [6qx2_l] [6qx2_S] [6qx2_w] [6qx2_J] [6qx2_n] [6qx2_s] [6qx2_W] [6qx2_E] [6qx2_j] [6qx2_a] [6qx2_t] [6qx2_K] [6qx2_L] [6qx2_D] [6qx2_o] [6qx2_c] [6qx2_k]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6QX2
  • Community annotation for 6QX2 at PDBWiki (http://pdbwiki.org)

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