6RHC Peptide Binding Protein date Apr 19, 2019
title Fragment Az-003 Binding At The Tazps8914-3-3 Sigma Interfac
authors S.Genet, M.Wolter, X.Guillory, B.Somsen, S.Leysen, P.Castaldi, C.O
compound source
Molecule: 14-3-3 Protein Sigma
Chain: A
Synonym: Epithelial Cell Marker Protein 1,Stratifin
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sfn, Hme1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Ww Domain-Containing Transcription Regulator Prot
Chain: P
Synonym: Transcriptional Coactivator With Pdz-Binding Motif
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: C 2 2 21
R_factor 0.181 R_Free 0.197
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.025 112.307 62.697 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.20 Å
ligand CL, K48, MG, SEP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein kinase C inhibitor a...
  • positive regulation of prote...

  • Primary referenceFragment-based Differential Targeting of PPI Stabilizer Interfaces., Guillory X, Wolter M, Leysen S, Neves JF, Kuusk A, Genet S, Somsen B, Morrow J, Rivers E, van Beek L, Patel J, Goodnow R, Schoenherr H, Fuller N, Cao Q, Doveston RG, Brunsveld L, Arkin MR, Castaldi MP, Boyd H, Landrieu I, Chen H, Ottmann C, J Med Chem. 2020 Jun 5. doi: 10.1021/acs.jmedchem.9b01942. PMID:32501690
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (6rhc.pdb1.gz) 91 Kb
  • LPC: Ligand-Protein Contacts for 6RHC
  • CSU: Contacts of Structural Units for 6RHC
  • Structure Factors (782 Kb)
  • Retrieve 6RHC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6RHC from S2C, [Save to disk]
  • View 6RHC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6RHC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6rhc_A] [6rhc_P]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6RHC
  • Community annotation for 6RHC at PDBWiki (http://pdbwiki.org)

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