6RV7 Hydrolase date May 31, 2019
title Crystal Structure Of Glucuronoyl Esterase From Cerrena Unico Inactive S270a Variant In Complex With The Aldouronic Acid
authors H.A.Ernst, C.Mosbech, A.Langkilde, P.Westh, A.Meyer, J.W.Agger, S.
compound source
Molecule: 4-O-Methyl-Glucuronoyl Methylesterase
Chain: A, B
Synonym: Glucuronoyl Esterase,Ge
Ec: 3.1.1.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Cerrena Unicolor
Organism_taxid: 90312
Expression_system: Komagataella Pastoris
Expression_system_taxid: 4922
Expression_system_variant: X-33
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ppicz-Alpha
symmetry Space Group: P 41 21 2
R_factor 0.166 R_Free 0.194
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.781 84.781 260.380 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.73 Å
ligand EDO, GCV, NAG, XYL, XYP enzyme Hydrolase E.C.3.1.1 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (249 Kb) [Save to disk]
  • Biological Unit Coordinates (6rv7.pdb1.gz) 121 Kb
  • Biological Unit Coordinates (6rv7.pdb2.gz) 123 Kb
  • LPC: Ligand-Protein Contacts for 6RV7
  • CSU: Contacts of Structural Units for 6RV7
  • Structure Factors (3953 Kb)
  • Retrieve 6RV7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6RV7 from S2C, [Save to disk]
  • View 6RV7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6RV7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6rv7_B] [6rv7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6RV7
  • Community annotation for 6RV7 at PDBWiki (http://pdbwiki.org)

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