6T9L | Gene Regulation | date | Oct 28, 2019 |
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title | Saga Dub Module Bound To A Ubiqitinated Nucleosome | ||||||||||||||||||||||||||||||||||||||
authors | H.Wang, P.Cramer | ||||||||||||||||||||||||||||||||||||||
compound | source | ||||||||||||||||||||||||||||||||||||||
Molecule: Histone H3.2 Chain: A, E Engineered: Yes |
Organism_scientific: Xenopus Laevis Organism_common: African Clawed Frog Organism_taxid: 8355 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Histone H4 Chain: B, F Engineered: Yes |
Organism_scientific: Xenopus Laevis Organism_common: African Clawed Frog Organism_taxid: 8355 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Histone H2a Chain: C, G Engineered: Yes |
Organism_scientific: Xenopus Laevis Organism_common: African Clawed Frog Organism_taxid: 8355 Gene: Hist1h2aj, Loc494591 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Histone H2b 1.1 Chain: D Synonym: H2b1.1 Engineered: Yes |
Organism_scientific: Xenopus Laevis Organism_common: African Clawed Frog Organism_taxid: 8355 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Histone H2b Chain: H Engineered: Yes |
Organism_scientific: Xenopus Laevis Organism_common: Western Clawed Frog Organism_taxid: 8355 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
Molecule: Widom601 Dna (145-Mer) Chain: I Engineered: Yes |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||||||||||||||||||||||||||
Molecule: Widom601 Dna (145-Mer) Chain: J Engineered: Yes |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||||||||||||||||||||||||||
Molecule: Ubiquitin Carboxyl-Terminal Hydrolase 8 Chain: K Synonym: Deubiquitinating Enzyme 8,Ubiquitin Thioesterase 8 Ubiquitin-Specific-Processing Protease 8; Ec: 3.4.19.12 Engineered: Yes Other_details: This Is A Zinc Containing Protein. |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 Gene: Ubp8, Ymr223w, Ym9959.05 Expression_system: Saccharomyces Cerevisiae S288c Expression_system_taxid: 559292 | ||||||||||||||||||||||||||||||||||||||
Molecule: Transcription And Mrna Export Factor Sus1 Chain: L |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||||||||||||||||||||||||||
Molecule: Saga-Associated Factor 11 Chain: M Synonym: 11 Kda Saga-Associated Factor Other_details: This A Zinc-Finger Containing Protein. |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||||||||||||||||||||||||||
Molecule: Saga-Associated Factor 73 Chain: N Synonym: 73 Kda Saga-Associated Factor,Saga Histone Acetylt Complex 73 Kda Subunit; Other_details: This A Zinc-Finger Containing Protein. |
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c); Organism_common: Baker'S Yeast Organism_taxid: 559292 | ||||||||||||||||||||||||||||||||||||||
Molecule: Polyubiquitin-C Chain: O Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ubc Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||||||||||
symmetry | Space Group: P 1 |
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crystal cell |
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method | Electron Microscopy | resolution | 3.60 Å | ||||||||||||||||||||||||||||||||||||
ligand | ZN | enzyme | Hydrolase E.C.3.4.19.12 BRENDA | ||||||||||||||||||||||||||||||||||||
Gene Ontology |
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