6T9P Hydrolase date Oct 28, 2019
title Human Butyrylcholinesterase In Complex With 2-(N-Hydroxyimin [(1r)-3-{4-[(2-Methyl-1h-Imidazol-1-Yl)Methyl]-1h-1,2,3-Tri Yl}-1- Phenylpropyl]Acetamide
authors X.Brazzolotto, G.Sinko, N.Marakovic, A.Knezevic
compound source
Molecule: Cholinesterase
Chain: A
Synonym: Acylcholine Acylhydrolase,Butyrylcholine Esterase, Esterase II,Pseudocholinesterase;
Ec: 3.1.1.8
Engineered: Yes
Other_details: N17q, N455q, N481q, N486q Mutations Compared Wild Type Sequence To Avoid Too Much N-Glycozylation. Numer The Maturated Enzyme (Devoid Of The Signal Peptide)
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bche, Che1
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
symmetry Space Group: I 4 2 2
R_factor 0.210 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
154.140 154.140 127.520 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand FUC, GOL, MXB, NAG, SO4, TGY enzyme Hydrolase E.C.3.1.1.8 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceEnantioseparation, in vitro testing, and structural characterization of triple-binding reactivators of organophosphate-inhibited cholinesterases., Marakovic N, Knezevic A, Roncevic I, Brazzolotto X, Kovarik Z, Sinko G, Biochem J. 2020 Jul 8. pii: 225725. doi: 10.1042/BCJ20200192. PMID:32639532
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (190 Kb) [Save to disk]
  • Biological Unit Coordinates (6t9p.pdb1.gz) 183 Kb
  • Biological Unit Coordinates (6t9p.pdb2.gz) 1447 Kb
  • LPC: Ligand-Protein Contacts for 6T9P
  • CSU: Contacts of Structural Units for 6T9P
  • Structure Factors (451 Kb)
  • Retrieve 6T9P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6T9P from S2C, [Save to disk]
  • View 6T9P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6T9P
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6t9p_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6T9P
  • Community annotation for 6T9P at PDBWiki (http://pdbwiki.org)

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