6TGD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, N8Q, ZN enzyme
Primary referenceVirtual screening identifies broad-spectrum beta-lactamase inhibitors with activity on clinically relevant serine- and metallo-carbapenemases., Spyrakis F, Santucci M, Maso L, Cross S, Gianquinto E, Sannio F, Verdirosa F, De Luca F, Docquier JD, Cendron L, Tondi D, Venturelli A, Cruciani G, Costi MP, Sci Rep. 2020 Jul 29;10(1):12763. doi: 10.1038/s41598-020-69431-y. PMID:32728062
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk]
  • Biological Unit Coordinates (6tgd.pdb1.gz) 57 Kb
  • Biological Unit Coordinates (6tgd.pdb2.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 6TGD
  • CSU: Contacts of Structural Units for 6TGD
  • Structure Factors (3059 Kb)
  • Retrieve 6TGD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6TGD from S2C, [Save to disk]
  • View 6TGD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6tgd_A] [6tgd_B]
  • SWISS-PROT database:

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