6UH8 Hydrolase date Sep 27, 2019
title Crystal Structure Of Dad2 N242i Mutant
authors P.Sharma, C.Hamiaux, K.C.Snowden
compound source
Molecule: Decreased Apical Dominance 2
Chain: A, B
Synonym: Dad2
Engineered: Yes
Mutation: Yes
 Organism_scientific: Petunia Hybrida
Organism_common: Petunia
Organism_taxid: 4102
Gene: Dad2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta Gami 2
symmetry Space Group: P 65
R_factor 0.138 R_Free 0.165
crystal
cell
length a length b length c angle alpha angle beta angle gamma
133.736 133.736 99.764 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.58 Å
ligand GOL, MES, MG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (200 Kb) [Save to disk]
  • Biological Unit Coordinates (6uh8.pdb1.gz) 97 Kb
  • Biological Unit Coordinates (6uh8.pdb2.gz) 98 Kb
  • Biological Unit Coordinates (6uh8.pdb3.gz) 193 Kb
  • LPC: Ligand-Protein Contacts for 6UH8
  • CSU: Contacts of Structural Units for 6UH8
  • Structure Factors (5738 Kb)
  • Retrieve 6UH8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6UH8 from S2C, [Save to disk]
    • View 6UH8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6UH8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6uh8_A] [6uh8_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6UH8
  • Community annotation for 6UH8 at PDBWiki (http://pdbwiki.org)

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