6UQK Transport Protein date Oct 20, 2019
title Cryo-Em Structure Of Type 3 Ip3 Receptor Revealing Presence Binding Peptide
authors C.M.Azumaya, E.A.Linton, C.J.Risener, T.Nakagawa, E.Karakas
compound source
Molecule: Inositol 1,4,5-Triphosphate Receptor, Type 3
Chain: A, B, C, D
Synonym: Ip3 Receptor Isoform 3,Insp3r3,Type 3 Inositol 1,4 Trisphosphate Receptor,Type 3 Insp3 Receptor;
Engineered: Yes
Other_details: The Full Sequence Of The Sample Is Mssflhigdivslyaegsvngfistlglvddrcvvepaagdldnppkkfrdclfkvcpm Kakqtkqdkek Iadvvllqklqhaaqmeqkqndtenkkvhgdvvkygsviqllhmksn Alleknamrvtldatgnegswlf Iqpfwklrsngdnvvvgdkvilnpvnagqplhasnyelsdnagckevnsvncntswkin Evlkggdvvrl Fhaeqekfltcdeykgklqvflrttlrqsatsatssnalwevevvhh Nglyrfkhlatgnylaaeenpsy Kgdasdpkaagmgaqgrtgrrnagekikyclvavphgndiaslfeldpttlqktdsfvp Ctntwiqstnv Pidieeerpirlmlgtcptkedkeafaivsvpvseirdldfandass Egfisqndrrfviqlledlvffv Sdvpnngqnvldimvtkpnrerqklmreqnilkqvfgilkapfrekggegplvrleels Frlcyrvlrhs Qedyrknqehiakqfgmmqsqigydilaedtitallhnnrkllekhi Lvrknreprfldylsdlcvsnhi Aipvtqelickcvldpknsdilirtelrpvkemaqsheylsieyseeevwltwtdknne Qearagnahde Nvlsyyryqlklfarmcldrqylaideisqqlgvdliflcmademlp Mlhvhvdrdpqelvtpvkfarlw Teiptaitikdydsnlnasrddkknkfantmefvedylnnvvseavpfaneeknkltfe Fgfysfsellr Ltrtllgiidcvqgppamlqayedpggknvrrsiqgvghmmstmvls Lsagasaaepldrskfeenediv Vmetklkileilqfilnvrldyrisyllsvfkkefvevfpmqdsgadgtapafdsttan Eamfgvgktss Mlevddeggrmflrvlihltmhdyaplvsgalqllfkhfsqrqeamh Aqdvenykvikseldrlrtmvek Selwvdkkgsgkgeeveagaakdkkerptdeegflhppgekssenyqivkgilerlnkm Qqrllknmdah Kvmldllqipydkgdakmmeilrythqflqkfcagnpgnqallhkhl Aetmqhiflnnyqlcseisepvl Qhfvhllathgrhvqyldflhtvikaegkyvkkcqdmimteltnagddvvvfyndkasl Rdgvedhsplm Yhislvdllaacaegknvyteikctsllpledvvsvvthedcitevk Yvdtevemkeiytsnhiwtlfen Ftldmarvcskrekrvadptlekyvlsvvldtinaffsspfsenstslqthqtivvqll Wlqqqhkgsve Acirtlamvakgraillpmdldahissmlssgascaaaaqrnassyk Ptanqwdykniieklqdiitale Erlkplvqaelsvlvdvlhwpellflegseayqrcesggflskliqhtkdlmeseeklc Llkktkygdrg Nqlrkmllqnylqnrkstsrgdlpdpigtgldpdwsaiaatqcrldk Itstknekifqesiglaihlldg Gnteiqksfhnlmmsdkkserffkvlhdrmkraqqetkstvavnmndlgsqphedrepv Fsipgsssrys Lgpslrrghevservqssemgtsvlimqpilrflqllcenhnrdlqn Ynlvcetlqfldimcgsttgglg Llglyinednvglviqtletlteycqgpchenqtcivthesngidiitalilndisplc Kdnasklllal Mesrhdsenaerilislrpqelvdvikkaylqeeerensevsprevg Srhnkqlqhllkpvkriqeeeae Gissmlslnnkqlsqmlkssapaqeeeedplayyenhtsqieivrqdrsmeqivfpvpg Hrlfttteqde Qgskvsdffdqssflhnemewqrklrsmpliywfsrrmtlwgsisfn Ffypymegastgvldsplisllf Wilicfsiaalftkrysirplivalilrsiyylgigptlnilgalnltnkivfvvsfvg Amvmdmeflyh Vgyiltsvlglfahelfysillfdliyreetlfnviksvtrngrsil Ylfsivgflflkddfilevdrlp Nnhstasplgmphgaaafvdtcsgdkmdcvsglsvpevleedreldsteracdtllmci Gggvgdilrkp Skdeslfparvvydllfffiviiivlnlifgviidtfadlrsekqkk Cglerdkfdnktvsfeehikleh Nmwnylyfivlvrvknktdytgpesyvaqmiknknldwfprmramslvsnegegeqnei Mklvshltaql Nelkeqmteqrkrrqrlgfvdvqncisrgenlyfqsawshpqfekgg Wshpqfek
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Itpr3
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.77 Å
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • inositol 1,4,5-trisphosphate...


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (961 Kb) [Save to disk]
  • Biological Unit Coordinates (6uqk.pdb1.gz) 927 Kb
  • LPC: Ligand-Protein Contacts for 6UQK
  • CSU: Contacts of Structural Units for 6UQK
  • Retrieve 6UQK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6UQK from S2C, [Save to disk]
    • View 6UQK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6UQK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6uqk_B] [6uqk_A] [6uqk_D] [6uqk_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6UQK
  • Community annotation for 6UQK at PDBWiki (http://pdbwiki.org)

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