6VPY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, GOL	enzyme
Gene Ontology	Chain Function Process Component B, L
Primary reference	The Effects of Framework Mutations at the Variable Domain Interface on Antibody Affinity Maturation in an HIV-1 Broadly Neutralizing Antibody Lineage., Zhou JO, Zaidi HA, Ton T, Fera D, Front Immunol. 2020 Jul 17;11:1529. doi: 10.3389/fimmu.2020.01529. eCollection, 2020. PMID:32765530

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (274 Kb) [Save to disk] Biological Unit Coordinates (6vpy.pdb1.gz) 135 Kb Biological Unit Coordinates (6vpy.pdb2.gz) 137 Kb LPC: Ligand-Protein Contacts for 6VPY CSU: Contacts of Structural Units for 6VPY Structure Factors (1008 Kb) Retrieve 6VPY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6VPY from S2C, [Save to disk]

View 6VPY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6vpy_A] [6vpy_B] [6vpy_H] [6vpy_L] SWISS-PROT database:

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