6WLY Transferase date Apr 20, 2020
title Pak4 Kinase Domain In Complex With Limk1 Thr508 Substrate Pe
authors A.K.Chetty, B.H.Ha, T.J.Boggon
compound source
Molecule: Serinethreonine-Protein Kinase Pak 4
Chain: A
Synonym: P21-Activated Kinase 4,Pak-4
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pak4, Kiaa1142
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Lim Kinase 1 Peptide
Chain: B
Synonym: Limk-1
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 41 21 2
R_factor 0.186 R_Free 0.205
length a length b length c angle alpha angle beta angle gamma
61.626 61.626 179.596 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand SEP enzyme Transferase E.C. BRENDA
Primary referenceRecognition of physiological phosphorylation sites by p21-activated kinase 4., Chetty AK, Sexton JA, Hak Ha B, Turk BE, Boggon TJ, J Struct Biol. 2020 Jun 22:107553. doi: 10.1016/j.jsb.2020.107553. PMID:32585314
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk]
  • Biological Unit Coordinates (6wly.pdb1.gz) 105 Kb
  • LPC: Ligand-Protein Contacts for 6WLY
  • CSU: Contacts of Structural Units for 6WLY
  • Structure Factors (673 Kb)
  • Retrieve 6WLY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6WLY from S2C, [Save to disk]
  • View 6WLY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6WLY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6wly from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6wly_A] [6wly_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6WLY
  • Community annotation for 6WLY at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science