6WVR Structural Protein date May 06, 2020
title Tubulin Dimers From A 13-Protofilament, Taxol Stabilized Mic
authors G.E.Debs, M.Cha, A.R.Huehn, C.V.Sindelar
compound source
Molecule: Tubulin Alpha-1b Chain
Chain: A, C
Synonym: Alpha-Tubulin Ubiquitous, Tubulin K-Alpha-1, Tubul Ubiquitous Chain;
 Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: Tubulin Beta Chain
Chain: B, D
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 2.90 Å
ligand GDP, GTP, MG, TA1 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


D, B


Primary referenceDynamic and asymmetric fluctuations in the microtubule wall captured by high-resolution cryoelectron microscopy., Debs GE, Cha M, Liu X, Huehn AR, Sindelar CV, Proc Natl Acad Sci U S A. 2020 Jul 7. pii: 2001546117. doi:, 10.1073/pnas.2001546117. PMID:32636254
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (454 Kb) [Save to disk]
  • Biological Unit Coordinates (6wvr.pdb1.gz) 447 Kb
  • LPC: Ligand-Protein Contacts for 6WVR
  • CSU: Contacts of Structural Units for 6WVR
  • Retrieve 6WVR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6WVR from S2C, [Save to disk]
    • View 6WVR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6WVR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6wvr_A] [6wvr_B] [6wvr_C] [6wvr_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6WVR
  • Community annotation for 6WVR at PDBWiki (http://pdbwiki.org)

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