6YAP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DMS, EDO, FAD, OHZ enzyme
Primary referenceDiphenylurea-derived cytokinin oxidase/dehydrogenase inhibitors for biotechnology and agriculture., Nisler J, Kopecny D, Pekna Z, Koncitikova R, Koprna R, Murvanidze N, Werbrouck SPO, Havlicek L, De Diego N, Kopecna M, Wimmer Z, Briozzo P, Morera S, Zalabak D, Spichal L, Strnad M, J Exp Bot. 2020 Sep 18. pii: 5908322. doi: 10.1093/jxb/eraa437. PMID:32945834
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk]
  • Biological Unit Coordinates (6yap.pdb1.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 6YAP
  • CSU: Contacts of Structural Units for 6YAP
  • Structure Factors (444 Kb)
  • Retrieve 6YAP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6YAP from S2C, [Save to disk]
  • View 6YAP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6yap_A]
  • SWISS-PROT database:

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