6YBS		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	5MC, A2M, JMH, MG, PSU, ZN	enzyme
Gene Ontology	Chain Function Process Component V cytosolic small ribosomal su... X cytosolic small ribosomal su... Y cytosolic small ribosomal su... Z cytosolic small ribosomal su... a cytosolic small ribosomal su... b cytosolic small ribosomal su... c protein tyrosine kinase inhi... d cytosolic small ribosomal su... e small ribosomal subunit cytosolic small ribosomal su... f small ribosomal subunit cytosolic small ribosomal su... h cytosolic small ribosomal su... i small ribosomal subunit cytosolic small ribosomal su... k intracellular transport of v... small ribosomal subunit cytosolic small ribosomal su... m cytosolic small ribosomal su... n small ribosomal subunit cytosolic small ribosomal su... o eukaryotic translation initi... x eukaryotic translation initi...
Primary reference	Structure of a human 48S translational initiation complex., Brito Querido J, Sokabe M, Kraatz S, Gordiyenko Y, Skehel JM, Fraser CS, Ramakrishnan V, Science. 2020 Sep 4;369(6508):1220-1227. doi: 10.1126/science.aba4904. PMID:32883864

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (523 Kb) [Save to disk] Biological Unit Coordinates (6ybs.pdb1.gz) 507 Kb LPC: Ligand-Protein Contacts for 6YBS CSU: Contacts of Structural Units for 6YBS Retrieve 6YBS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6YBS from S2C, [Save to disk]

View 6YBS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6ybs_Y] [6ybs_Z] [6ybs_A] [6ybs_V] [6ybs_X] [6ybs_a] [6ybs_b] [6ybs_c] [6ybs_d] [6ybs_e] [6ybs_f] [6ybs_h] [6ybs_i] [6ybs_k] [6ybs_m] [6ybs_n] [6ybs_o] [6ybs_x] SWISS-PROT database:

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