6YE4 Metal Transport date Mar 24, 2020
title Structure Of Exbb Pentamer From Serratia Marcescens By Singl Cryo Electron Microscopy
authors V.Biou, P.Delepelaire, P.D.Coureux, M.Chami
compound source
Molecule: Biopolymer Transport Protein Exbb
Chain: A, B, C, D, E
Synonym: Tol-Pal System-Associated Acyl-Coa Thioesterase
Engineered: Yes
Other_details: A 6-Histidine Tag Is Present At The C-Termin
 Organism_scientific: Serratia Marcescens
Organism_taxid: 615
Gene: Exbb, Fg174_21755, Pwn146_03792
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbad24
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.20 Å
ligand PGT enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (170 Kb) [Save to disk]
  • Biological Unit Coordinates (6ye4.pdb1.gz) 162 Kb
  • LPC: Ligand-Protein Contacts for 6YE4
  • CSU: Contacts of Structural Units for 6YE4
  • Retrieve 6YE4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6YE4 from S2C, [Save to disk]
    • View 6YE4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6YE4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ye4_B] [6ye4_A] [6ye4_D] [6ye4_C] [6ye4_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6YE4
  • Community annotation for 6YE4 at PDBWiki (http://pdbwiki.org)

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