6YND date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CSU, XPE enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, C, G, F, E, A, B, H


Primary referencePartial catalytic Cys oxidation of human GAPDH to Cys-sulfonic acid., Lia A, Dowle A, Taylor C, Santino A, Roversi P, Wellcome Open Res. 2020 Aug 25;5:114. doi: 10.12688/wellcomeopenres.15893.2., eCollection 2020. PMID:32802964
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (835 Kb) [Save to disk]
  • Biological Unit Coordinates (6ynd.pdb1.gz) 415 Kb
  • Biological Unit Coordinates (6ynd.pdb2.gz) 416 Kb
  • LPC: Ligand-Protein Contacts for 6YND
  • CSU: Contacts of Structural Units for 6YND
  • Structure Factors (64183 Kb)
  • Retrieve 6YND in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6YND from S2C, [Save to disk]
  • View 6YND in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ynd_A] [6ynd_B] [6ynd_C] [6ynd_D] [6ynd_E] [6ynd_F] [6ynd_G] [6ynd_H]
  • SWISS-PROT database:

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